Discovering the full spectrum of Japan requires more than a single railway journey. By treating the bustling metropolis of Tokyo as a central anchor, you can unlock distinct regional loops, hidden coastal paths, and far-flung historical cities.
Whether you are planning a sequence of return trips or crafting a multi-week slow travel adventure, this comprehensive itinerary hub organises our firsthand journeys into logical, seamless routes. Dive in to explore regional rail loops, flight logistics, local food specialities, and off-the-beaten-track cultural gems.
Route 1: The Tokaido & Izu Peninsula Coastal Loop
From historic hot spring towns to rugged volcanic coastlines, this route heads south of Tokyo to explore the natural beauty and deep-rooted heritage of Shizuoka and Hakone.
We took the JR Sobu Line from Tokyo to Totsuka, from where we changed trains to Atami. The limited express “Odoriko” is also an option.
From Atami, we had a wonderful day trip to Johasak Coast Hiking Route. We started walking 11km from Jōgasaki Kaigan Station to Izu Kogen Station where we took a train to go back to Atami.
- ➡ Jogasaki Coast Hiking Guide: Walking from Jogasaki Kaigan Station to Izu Kōgen (with Kinme Train!)
After Atami, we went to Mishima to stay and from Mishima we went to a day trip to the Old Hakone Highway.
We countinue to the west until Shizuoka and went back to Tokyo after seeking the view of Mt Fuji.
- ➡ Fuji City One-day Sightseeing
- ➡ Cloudy Skies and No View of Mt Fuji… but a Half-Day Tour of Shizuoka City
Route 2: The Grand Kyushu Overland Expedition
Fly from the capital to the subtropical gateway of Fukuoka, before embarking on a dramatic journey through Kyushu’s historic cities and active volcanic landscapes.
We took a highway bus to get to Nagasaki from Fukuoka, which only cost 2,700 yen for the 2,5 hour journey.
- ➡ Visiting Nagasaki Day 1: Peace Memorial Park and Love Hotel Experience
- ➡ Visiting Nagasaki Day 2: Glover Garden and the Best City Views
After two nights in Nagasaki, we went to Kumamoto by bus.
We took a bus from Kumamoto to Kagoshima where we had an amazing meeting with a local couple who ended up taking us around in the volcanic island, Sakurajima, next day.
Route 3: The Hokuriku, Shinetsu & Northern Kanto Rail Loop
An expert-level overland circuit combining the high-speed Shinkansen network with charming local railways to cross from the Sea of Japan over to historic Tochigi.
We took Shinkansen to Kanazawa from Tokyo.
And from Kanazawa, we took a bus to Toyama which only took 1 hour 10 minutes.
After walking around in Toyama City, we took local trains heading Niigata where we had a very nice time at the sake brewery.
- ➡ Toyama to Niigata by Local Train: Why Your Suica/IC Card Won’t Work
- ➡ Imayotsukasa Sake Brewery Tour in Niigata City: Only 15 Minute Walk from the Railway Station
We took a three-hour bus from Niigata to Koriyama, slowly moving towards Kanto area.
Our next destination was Nikko, but we decided to stay Utsunomiya where there are more reasonable accommodations. We took three local trains to get there from Koriyama.
We visited Nikko, UNESCO World Heritage Sites. This is how we travelled to Nikko from Utsunomiya.
Route 4: Tokyo & Suburbs: Day Trips and Family Excursions
You do not need to travel far for incredible experiences. These curated itineraries highlight hidden Tokyo neighborhoods, seasonal flower festivals, and overnight family getaways.
- ➡ Beyond the Tourist Spots: A Friday in Tokyo from Korean Lunch to Shinbashi Nightlife
- ➡ Japanese Wisteria and Azalea Festivals in Tokyo, Kameido Tenjin Shrine and Nezu Shrine
- ➡ Visiting Tsukiji Market and Meiji Shrine: Sightseeing in Tokyo with Our Family
- ➡ How to Get to Kamakura from Tokyo and 5 Places for Sightseeing: Our Overnight Trip with Family
- ➡ Kawagoe Day Trip from Tokyo: A Guide to the “Little Edo” and Sake Testing
Global Connections: Arriving in Japan & Onward Travel
The logistical realities of long-haul travel, international stopovers, and planning budget-friendly regional flights across Southeast Asia.
- ➡ How we travelled from Georgia to Dubai and on to Japan
- ➡ Tokyo, Haneda to Bacolod in Philippines via Manila by Air: ANA and Cebu Pacific
- ➡ Getting from Tokyo to Hanoi for Under US0 with Vietjet Air: Do They Check the Baggage Weight?
Quick Tips for Navigating This Hub
- Interlinked Architecture: Each section represents a standalone journey. For the ultimate Japanese holiday, you can merge Route 1 and Route 3 into a magnificent multi-week overland loop.
- Local Transit Warning: Pay close attention to our guide on travelling from Toyama to Niigata—navigating IC card boundaries between different railway companies is a common pitfall for international visitors!
➡ Return to Japan Travel Guide